Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHDKAFTFQTLRPDTIIDGLFDLGMRVDSGLTPL-NSYENRVYQFQDEERHRYVVKFYRPERWSAEQILEEHQFALQLVED-EVPVAAPLLFNDSTLHQHQGFYFAVFPSLGGRQFEA-----DNLDQMEWVGRYLGRLHQTGRKQRFTAR-PEIGVQEYLLEPRQVFEQATLIPSGLKADFLKATDKLIAAVMEQWHGRGNTLRLHGDCHAGNILWR-D--GPLFVDLDDARTGPAIQDLWMLLNGDKAEQRMQLETIVEAYEEFSPFNSDE-IALIEPLRAMRLVYYLAWLLRRWDDPAFPVNFPWLTGEDYWRGQTSTFLEQVKVLQEPPLQLTPMY
5IGI Chain:A ((5-280))--------TTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRA-EVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDR---VRREF-VVNDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVF---GEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALF------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1182 -45619 -38.59 -173.45
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -38.59
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.301

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: