Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNRVSSALEDAFPNRTVDNVSSAGISWNAQNRTVAVDFGDGQRVFLKVAVNGD-RSRIERERAVISYVGANCAVSVPNVIATETTG-PVPY----LATEPVSGQPLTTLLADATRTERAALAHDVGSALARVHDCRFEEHGHVVGGDADHLELDTGTWTDVLVETISEMREMAPCDRFDQHFEMVSDAVERNRDRLDRASATLLHGDPACPNCFRTG-D-GVGFLDWELSHVGDPVRDRSRTLDQQFDSLREGSPEGVVSAFYDGYRSQAGGLPSGFEERRPIYEVIRLLSVSGYFERTADYRDESRSDLAAWLEAEMRRRLDAIRR
5IGI Chain:A ((10-256))--SQLYALAAR-HGLKLHGPLTVN--ELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWV---VPQDSEVFAESFATALAALHAVPISAAVDAGM-----LIRTPTQARQKVADDVDRVRREF--VVNDKRLHRWQRWLDDDSSW--PDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVF--------GEEGLAKLLLTYEAAGG--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 996 -16156 -16.22 -67.88
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -16.22
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: