Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDAQGSLVHELK-SLPC-WPA---PVQAIRPL-TGLSGGSLLIELCD--------GRRYVARSQNAQLQMQAVSRERERQVLCAIGEQVARSD-FLPQVLFYNARWLVVSWLEGSPWPHTLADDACAQRHLVTLMRRFHPVDSE-LQ-L-DIPSRLQFYRQQLSAEK--Q---PE--------ALFSLCARFASLRSPCWWFPVLAHHDIHPGNVVSDG-------ATLALIDWEYAARSPLACELILLFEANGFN------------------RAQRQQFCRYYAEAIYSTETVYAADSKCVGSSAAALEDWLHRLQQDIASWQPWCEMLMAMWSAIRFEQT-DDVQYAVWRDNYLKAAEQSLGKRE
5FTG Chain:A ((8-373))---TRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-------EAMVLESVMFAIL----AERSLG-PKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQN------DF-ENLSTEEKSI-I-KEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAYFHQK----


General information:
TITO was launched using:
RESULT:

Template: 5FTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1080 -23588 -21.84 -83.05
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -21.84
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_5FTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ftg-query.scw
PDB file : Tito_Scwrl_5FTG.pdb: