Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQPPRKAVEEPLNAFKESKGMMNDE
1Z9M Chain:A ((38-141))------------------QDDSQPWTSDETVVAGGTVVLKCQVKDHEDSS-----LQWSNPAQQTLYFGEKRALR-------DNRIQLVTSTPHELSISISNVA-LADEGEYTCSIF-----TMPVRTAKSLVTVLGIPQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Z9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 502 -27089 -53.96 -260.47
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -53.96
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.100

(partial model without unconserved sides chains):
PDB file : Tito_1Z9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1z9m-query.scw
PDB file : Tito_Scwrl_1Z9M.pdb: