Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRDAHERLTERFEDYRIVRKLRRVPPHEVYEASVDSRRAVYKGDTGPTGNAAVEGRVTALVGRETAVPVPETLRVGDDCYVTAWHPDAPAPDSSDEADEAWAAAAGRGLATLHTETEPLVDGCGPFRAADGGVRVETADDWHAAAVDHVRHRRSVLAEYGHADVADAAVEFLRDRPDAFDGAGDPVCCHGWWTPEHVAVEDGRVACVVDFEHATAAPGEWDYWRTVTPTFAACDEDTTAARRAFRRGYESVRPFSPGFERRRPYYGLLNGVYYLQSLYVQDRHGPAATAERAARFRARIFETISELDRGRLGRTAHPSRRVAFARHTPTSVMSRFDAVLFDLDGTLCENEQDVEHLYFGAFERAEVEPFGAPSDLWAVLEGPP--------TTPDEFEYY----REGFRTVAAEHGRAEADVSAVAREFVDGIDYGAVSLLGGAEAALADAGVGHRVGLMTNGPEYRQSVKLEALGLEDAFEVVVYAGDMERRKPHTDPFDRAVEALGVDASATLYVGNSLKYDVAGAREAGLPVAWYPDGDAD-------PG-SYDPDYVVESLAELADVLDGTVE
3UMC Chain:B ((21-253))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLP--CVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAGEFGLAL--DEALLQRITGF--WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHN-YDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLAAS--


General information:
TITO was launched using:
RESULT:

Template: 3UMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1001 -21597 -21.57 -101.39
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -21.57
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.200

(partial model without unconserved sides chains):
PDB file : Tito_3UMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3umc-query.scw
PDB file : Tito_Scwrl_3UMC.pdb: