Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------CVIGLTFNGNWVPNNRFVISPG----GKFSFIANYVII-PVRLDESCHWHQDLAENAKPVIIPSGYGIKSC----------------------------------------------------------
1KRR Chain:A ((2-201))NMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIG---RNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVES


General information:
TITO was launched using:
RESULT:

Template: 1KRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 110 -4269 -38.81 -67.76
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -38.81
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_1KRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1krr-query.scw
PDB file : Tito_Scwrl_1KRR.pdb: