Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDISIIAAQLVKEKVIS-HNPNSVKALNGGTTSTVYLL---DEKYVVKLNEAE-----VIREEAHFLSFYEGNTLF-SKLLYKEPLHTYIVYSFLEGS-TWCEQGHKRSTLRTLVKEVINKYKIVPEADGWGWKENPVQSWNEFLTTNVMEAYENVRRYISEEEYRTVLKLANR-DAGVNQPFLLHGDCGFHNFIFRENRLHGVIDPL-PVLGEPLYDLIYAFCST--PEDLTKETIAYAMKQCLFHKKERDLYEEIVIGLYLRIDTCLRHHPKDLEEYLVAWRYWMDEINPAL
4R78 Chain:A ((23-252))----KIIKEKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDI-EAGIKVNEYIESAITLDSTS--IKTKFDKIAPILQTIHTSAKELR-GEF-APFEEIKKY-ESLIEEQ---IPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQ--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 882 14598 16.55 67.90
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 16.55
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: