Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKPRFTLAEAKAMARDEFHV--RVAAIVELN-SYDDQNYKVTAENGAVYVLKVHNGVESR-DEGLLDAQSQLYERLRRKGVAAPYPVDSNP--LADGDATFALRLLEWVDGDLLSSKEITPGLLATTGAFLGRIRLALDDFDHAALHRVHLWDGR-QFPALASFADGLVDAG--CDVDKAA---DVHRAIANFDAVVAP-AAAQLPLATLHGDFNDANVLVGA---ETLGVLDIGDSVHSWRVNDVAVGMAYVVV
4WH3 Chain:A ((5-248))------NEVLFGI-ASHFALEGAVTGIEPYGDGHINTTYLVTTD-GPRYILQQMNTSIFPDTVNLMRNVELVTSTLKAQGKETLDIVPTTSGATWAEIDGGAWRVYKFIEHTVSYNLVPNPDVFREAGSAFGDFQNFLSEFDASQLTE-TIAHFHDTPHRFEDFKAALAADKLGRAAACQPEIDFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFG--


General information:
TITO was launched using:
RESULT:

Template: 4WH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 869 13783 15.86 60.45
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 15.86
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.317

(partial model without unconserved sides chains):
PDB file : Tito_4WH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4wh3-query.scw
PDB file : Tito_Scwrl_4WH3.pdb: