Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKMRNLISNYELAKDLLKNWEYDEENLDEMLSYFRISSNAIYPFFYKKKICFLRIAPTDEKRKENIYGEIEFIQYLREHDFKALCPVPSKNGEFIRIVNTKWGEYYATVFEKVAGKPVEACEYSEKMYHEYGKTMGRMHRLSSGFKPII------KKWTHEDVLNEIETMLTLY----------H-------CSNKAKIELENLRVELA-----KL-PKNHLSYGLIHYDFELDNVFYDEKTNTCSVIDFDDGMYHWYSTDIEQFLDSVSEEKGELEAEQVKIAFFEGYQSEYPIVEETKNSIPLMRRFINLYSYVRIHHCLSDSFTSEKEWMTELRVKLTNMLKSIEETW
2Q83 Chain:A ((18-305))--------KLTELAENVLQGWDVQAEKI----DVIQ---ALVWKVHTDSGAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK----HGSFLFVVYDWIEGRPFEL--TVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGEN-EQIWVIDLDTVSFDLPIRDLRKMIIPLLDT-TGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLF------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 979 -63856 -65.23 -250.41
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -65.23
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: