Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTTNPAAPAAPLAPPDPARIAKTVATKMPFRGDMTGLTPLAGDASNRRYFRIALKGTPSALILMQLADPEGFKKSEEAVSGASAQIAELPFTNVLAHLQR-TGVTVPQLHYYDR------------EAGLLYLEDFGDLTLAEACRDADHARLVALYRQAIDQLVLLQVKGTKPPAPGCIAFHRRFDVPLLMWEFDHFLEYGIVARLGQPMKPADDKAVRAEFQRIAELL--AGQSQVFVHRDYHSRNLMVDG----SRIGIIDFQDALMGPATYDLASLLKDAYI-ELDDAVVDGLVDQFLDGLAAHGQGWADRAAFRRLFDFTSIQRNLKAAGRFVYIDRVKHNPKFLADIPRVLGYVKRNLSKYPELATLRQHLAPYVAELQ
6EF6 Chain:A ((27-321))-----------------DVTIAQQALTHYDVS-DNASLRLL-NLSENA-TYLVEDGE--HQSILRVHRQDY--H----------QPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPADVPRHVVHFEMVGGAEPDEESL------TLDDFQTLGRITASLHEHSQRWTRPAGFG-RFSWDWEHCLGDTPRWGRWQDAEG-VGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHDPRLGEWQESWVAGYRSRR------ELPAADE-AMLPSFVFLRRLLLLAWMGSH---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1244 -49522 -39.81 -182.06
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -39.81
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.213

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: