Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNRVSSALEDAFPNRTVD--NVS--SAGISWNAQNRTVAVDFGD-------GQRVFLKVAVNGD------RSRIERERAVISYVGANCAVSVPNVIATETTG---PVPYLATEPVSGQPLTTLLA---------DATRTERAALAHDVGSALARVHDCRFEEHGHVVGGDADHLELDTGTWTDVLVETISEMREMAP-CDRFDQHFEMVSDAVERNRDRLD-RASATLLHGDPACPNCFRTGD-GVGFLDWELSHVGDPVRDRSRTLDQQFDSLREGS-----PE---GVVSAFYDGYRSQAGGLPSGFEERRPIYEVIRLLSVSGYFERTADYRDESRSDLAAWLEAEMRRRLDAIRR
3ATT Chain:A ((4-317))--AVISRWLSSVLPGGAAPEVTVESGVD--STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLT--------DTTLHRHFNW-VRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTG-VEL---GDLHWFYVYSGVMWA----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ATT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1140 26123 22.91 97.11
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 22.91
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.261

(partial model without unconserved sides chains):
PDB file : Tito_3ATT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3att-query.scw
PDB file : Tito_Scwrl_3ATT.pdb: