Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTKTSHFSPLDFPEQLRTYIEG-ATLSDSSSHSGATVLYL---DSGYYLKIDQKR------RLERETAIARWFETKGLGTPVIDYLSTDKDY--LLTKEAPG---KDALAFLDQPETICRTMAHALKKLHNLHPHNFPSENHLQTYKDRALKNYEKGEFYAKALLPQFQINSREE--AFQLIQEQGHLLKTD------AFIHGDACLPNFILKDASRFSCFIDLGLADFSDRHIDLFWAVWSLNYNLDNPKYAELFLDYYGREEVDTNKLRLVAAFEAFG
3Q2J Chain:A ((9-246))---------------ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK-LPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDS-------RLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG-KVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLG-------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 929 45897 49.40 213.47
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 49.40
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_3Q2J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3q2j-query.scw
PDB file : Tito_Scwrl_3Q2J.pdb: