Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADTPPLTLPEALRRTLPAARWELTHTNDAGTRVYR------SQRFLIKVHPRGP-SHPLFSEKERLRWLAPRVPVPPLAGYAEDADHAYLALARLPGMPM-----NHPDARLHARRNADLLARALAELHALPIRDCPFTHTLTERLRDLRTR----LTASGEIPT-----PVAERFNALVRQRPHDEDLVVTHGHATLEHVLVNGEYVEALTGVGRAGLADRHVDLAAAHTSLTQDYDPDAAAHFLDTYGRARIDLHKLDYYARLNALA
4FEU Chain:A ((20-271))------------LDADLYGYRWARDNVGQSGATIYRLYGKPNAPELFLK-HGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDS---GENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGE-FSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEF-


General information:
TITO was launched using:
RESULT:

Template: 4FEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 977 30143 30.85 130.49
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 30.85
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4FEU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4feu-query.scw
PDB file : Tito_Scwrl_4FEU.pdb: