Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEKDRAVVTELLQKAGREDFIPLQENQLAGDGSSRRFYRLASGGETLIAV-LPAGEEAKDRAESRAAYHIGGYLLACGTPVPAIYGWDEASGGLLFQDLGNTRLQDVAH-TEEGR-QLYRQLVRALAGMNCRARGIDSSWCWDSPCYDRSLMLER-ESGYFLRAFWQGL--LGQEVPIGLAEEFSSLADAVSLYSTD-FFLHRDFQSRNIMIH-----AGRPSIIDFQGGRRGPLGYDLASLLYDPYVDLDEDFRAL-LWEDYLAALGAQIDISREDFAKQYSLLACQRSL-QIIGAFSWLSAVAKKTFFVQFIRPSLLNLEKILSAPYYQNYR-VLRQTVRRGLSLYR-----
3CSV Chain:A ((4-333))---SREDEIRDFLATHG-----------YADWNRTPRYQRLRSPTGAKAVLMDWSPEEGGD---TQPFVDLAQYLRNLDISAPEIYAEEHARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTP-------ELARLDPETLS-EMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL--EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRDVPAQVEAQMI-----DHYIQATGVDESHFRSAYAVIAVQR-NMRILGIFARLSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1421 -36145 -25.44 -119.68
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -25.44
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: