Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSIYKSKLNEEKIKNILQEEYQIIAKKIEKIEEGTANIYIIFAEDEQKYILKEFDESRKEESIEKEIQIINFLRCRKISVPQYIKTKSNEFYIKYENEIIILQKFIDGYTIENNTGDHDKVIESATILGRIIKELQKYKKLDDENIIEKWFSKESLENKIIQMEDFKKSIKKDNKYKEVFLKDLENKIKISKKLKEQFDFSIISKMSIMNSHGDYSVQQLIYNNEKETSVIDFESAKRLPIMWEIIRSYTYIDKDVKNGEMNINTFVEYVNEISKYVELNEFDLKYCAYIYLIQIVGSLYGYKQYNENYEQIELLNFAIFRTNLCGYLYEHLDEIGTRLEKEVTEYMKKEKLDVLNERGEFTGIIETREECHKKGLWHRCVYAFVIDKDSNILLQKRSANKKLWPNLWDVTVGGHVDSGEFGRQALIRECKEELGIDICDKDIKYLVGSCSKTTKGKITNNQFNECYLITKDIDISKIKLQEEEVAEIKFFTKDEVLERINNNYDGLTDKTGPWNFLLKILEQR
1NFS Chain:A ((4-158))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAART---TSALQINDDEVMDYQWCDLADVLHGIDAT---------PWAF--------


General information:
TITO was launched using:
RESULT:

Template: 1NFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 744 -47269 -63.53 -304.96
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -63.53
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.127

(partial model without unconserved sides chains):
PDB file : Tito_1NFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nfs-query.scw
PDB file : Tito_Scwrl_1NFS.pdb: