Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePQPSDGLRRTWEEARENDCEVRIFSDKVNKYIQPLD-RFFITPGLETHYIINAGGVQYPVSFLAPKGCEAAITGKLPPTYGV
3SQG Chain:D ((165-192))--------------LVNDSYAKIFSGDDDL-VDSVDRRFILDINKE------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 36 -7507 -208.51 -278.02
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain D : 0.57

3D Compatibility (PKB) : -208.51
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.187

(partial model without unconserved sides chains):
PDB file : Tito_3SQG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sqg-query.scw
PDB file : Tito_Scwrl_3SQG.pdb: