Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSEALEQFVVEEAGVGAPRGASWSRVDEGQGANRVWRVRWGPGSSVIVKRCGPGRAFVQERRAATRWAPAVADASRGLGHARVLAASQALRCLVFVDA-GRGEEQVA-----------LSPAAFACAGRYLARLHALPVDERDPVP----LVEALARREARWLEGAPE---LRA-VASSLGPGALAD-A-DWGPRVPCHRDFQPDNWLWD-GRTLTVVDFEHARPDARALDLAKLWTRLDGDVDARANAAFWSAYLGPEPCSPS-FLAQLRAGLVLHGLASVAWGRSHDDEAFVAEGERAVALARSGREPPNPRAGTPLASL
5UXD Chain:A ((8-298))---DALLDLAARHGLDLD--GGTLRTEE-IGLDFRVAFARAHDGGDWVLRLPRRPDV-LERAAVEGRLLAMLAPH-LDVAVPDWRIST--SELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVRSPAQVRGAWRQDLARVGAEFEIAPALRERW-EAWLADDGCWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVSA----PSAIFEVALQAYAEGGGRPWPGLARHCTEMFSAAPLGYGLYALATGEAAHREAAAAALNPPE-----------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1205 -53377 -44.30 -199.91
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -44.30
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: