Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIINEEVIWIVNSLVGE--FEIIKDHRNSSNRTGVLEINAN-NKRMFIKIHNRL---SRWSPEVYAYKNWTHI-LGEYAPRLIHSFNDDNFYGIITTPIYGKTVNEYQI----------NDEDILEPIYYKAGELLKQLHNNFKGTYFGIPAIDGSPLESKAKTDPVDYINSALEDILKSGYDKGLFNNSDKELVKWCMKHSDV--FANSKPVPTNWDFSQNNWMVDEDGKFTGFIDFENMLWGIDVDSFGIVIERYTPNRPKLRKALFEGYGLENSEE-KQLQLKIVSVKM--AIADITYGASVGNDRIFSLGRNLMDNLKMPGFKIH
5IWU Chain:A ((4-299))--DIKQVIEIAKKHNLFLKEETIQFNESGL-DFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIY----TEELIAYKKLDGVPAGTIDHNIGNYIWEIDIN-NVPELFHKSLGRVLAELHSIPSNK-AAALD---LVV--HTPEEARMSMKQRMDAVRAKF---G----VGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAF---GEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEALEV---------


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1247 24107 19.33 87.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 19.33
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: