Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQQVISFLNENYPLHIHTAKAVTNEMYRCIDDQGTYYARITNYKPYEEQLEEVSWTNALYREGVG-VAPAIPSCRGQIVELMPPKDIIVVVYKAAPGIHLPRGE---------------WNADVLAELGRQIGRMHRITQSYEANHRLHHLGDWHDQEEYNFE-QYIPAEETAIRAIAANVLAEVKKLPRERATYGLIHGDLWLENILVDRGSSLTMIDFQDCEK---------HYYMYDLAVPLYSALEF-SF-A-G-----------AGNIRDYGISIANALLEGYQEEHTLDPEM-LKQLPLFLKLKEIFEYNLMNMYWDRERLSEEQIRIMNLYRLRIEHHVQLLEWD
4WZY Chain:A ((135-420))----------------------QSNTSVIF--G-KDAMLKVFRRV-TPGINPDIELNRVLAQAGNRHVARLLGSFETSWAGPGTDRCALGMVTAFAANSAEGWDMATASAREMFADVVGSDFADESYRLGNAVASVHATLAEALGTST----EPFPVDTVLARLQSAAR-SAPELAGRAAAVEERYRRLDGRAITVQRVHGDLHLGQVLRTPD-DWLLIDFEGEPGQPLDERRRPDSPLRDVAGVLRSFEYAAYQKLVELAPEQDADGRLADRARNWVDRNSAAFCAGYAAVAGDDPRRDGDVLAAYELDKAVYEAAY-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 964 -3236 -3.36 -13.21
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -3.36
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_4WZY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4wzy-query.scw
PDB file : Tito_Scwrl_4WZY.pdb: