Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERIKINSITIDEAKKHAVFVVKKELCCNVNKVQYLGGGSFGYIYKVDIDRPPYTVVMKACRCDNMCEREAFELNLLAKDSLIQIPKVYFTYLKDDIVSIDYICMEYVEGKDCFTDFSKLFLSKAKKRAFADKITSAMYAWHSKTNDKF---GLVQNA--N-YDEWLDYYKPFAFDILQKARNMVDRGELESYFLKVMELAWNNFDYIFSEKVEHASLIHGDLNVMNILADDKLNPIAIIDPLESKWADREYDLFQLKNLT---GNAFGLYEMYKSKYPTSKNCDLKVAFYAMFHEIYCYIRSGRRTKINHLRCLLNLKIELNNVSIHS
3W0S Chain:A ((6-277))------------LTATSVEKFLIEKFD-SVSDLMQLSEGEESRAFSFDVGGR--GYVLRVNSCADGFYKDRYVYRHFAS-AALPIPEVLDIGEFS--ESLTYCISRRAQGVTLQ-DL-----PETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAI---ADPHVYHWQ--TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNG-RITAVIDWSEAMFGDSQYEVANIFFWRPWLACMEQQTRYFERRHPEL-AGSPRLRAYMLRIGLDQLYQS--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1224 -66900 -54.66 -254.37
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -54.66
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_3W0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0s-query.scw
PDB file : Tito_Scwrl_3W0S.pdb: