Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVMRSPLLLAALADAAVPGIRPIKVEGLPVPAGDLYQSAHITGA-DGRVWLVRSALTGAAGAELAASDALVQLLTRR-VDFDVPRVEGSARPKEGSAVAVYARPRGRALDWRHL------------AGRSAAARALGQALAHLHGVDPRVVEEAGLATYDADTYRQRLRADVDRAAATSRVPSALIARWREALDTPALWRFSTTVTHGPLRGADVHVDE-GEVSAISGWEHAGVADPARDFALLWNSAPQQAFDTVFEAYAAERAERPDPNLERRVRLMGEMELAYALLASRTMGDDARVERHAAALEELAFEVEGDSSLLPPARRAGTAPIDLVPPLDPADIEVVDAEVGEEDATVEIPVRLAPEREDRSEHAGATRVDGDAARTRLPHGSSEEPAASSDDSAGAVADESSGGNARSR
5IWU Chain:A ((1-297))--MSKDIKQVIEIAKKHNLFLKEETIQFN--ESGLDF-QAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIYT-----EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGY-YWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEAL----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1269 5822 4.59 20.64
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 4.59
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: