Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKSPDLPVLPGSDQVAPASAIWSSETWRWEAVRWMDTALARRGLERVPTTPLQPRVRPWSTVLVAETTDQ-GRVWFKATSP-----EMSPEAAILRALRSVTPDAVPVVWADDPE-------RGWLLMPD-QGPVLRDVQRDDDAVSLMSSVVRRYARLQRSSTRVVDQLR-DAGVPDMSPR----ESARRWQRL----GLKPDTTREVRRAAQRLDAVGLPLTIQHDDLHAGNVFADGTSAGAHDARIFDWGDASVGNPLCSLLVPLERIGEGLDDDAARAARERILRAYLSVWSDVVSSTALSAAVDDALLIARVGRVFTWQRALTRASADERHAWGVHGRRLIAEINRSLGHAPEPSHD
5IGI Chain:A ((12-239))-----------------------------------LYALAARHGLKLHGP-LTVNELGLDYRIVIAT-VDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWV----VPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNT---ERVSGMIDWSEARVDDPAIDMAAHLMVF-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 705 3423 4.86 16.78
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 4.86
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: