Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEQQVISFLNENYPLHIHTAKAVTNEMYRCIDDQGTYYARITNYKPYEEQLEEVSWTNALYREGVG-VAPAIPSCRGQIVELMPPKDIIVVVYKAAPGIHLPRGE---------------WNADVLAELGRQIGRMHRITQSYEANHRLHHLGDWHDQEEYNFE-QYIPAEETAIRAIAANVLAEVKKLPRERATYGLIHGDLWLENILVDRGSSLTMIDFQDCEK---------HYYMYDLAVPLYSALEF-SF-A-G-----------AGNIRDYGISIANALLEGYQEEHTLDPEM-LKQLPLFLKLKEIFEYNLMNMYWDRERLSEEQIRIMNLYRLRIEHHVQLLEWD 4U98 Chain:A ((135-420)) ----------------------QSNTSVIF--G-KDAMLKVFRRV-TPGINPDIELNRVLAQAGNRHVARLLGSFETSWAGPGTDRCALGMVTAFAANSAEGWDMATASAREMFADVVGSDFADESYRLGNAVASVHATLAEALGTST----EPFPVDTVLARLQSAAR-SAPELAGRAAAVEERYRRLDGRAITVQRVHGDLHLGQVLRTPD-DWLLIDFEGEPGQPLDERRRPDSPLRDVAGVLRSFEYAAYQKLVELAPEQDADGRLADRARNWVDRNSAAFCAGYAAVAGDDPRRDGDVLAAYELDKAVYEAAY-----------------------------------

General information: TITO was launched using: RESULT: Template: 4U98.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 983 -691 -0.70 -2.82 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.61 3D Compatibility (PKB) : -0.70 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.344

(partial model without unconserved sides chains): PDB file : Tito_4U98.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4u98-query.scw PDB file : Tito_Scwrl_4U98.pdb: