Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSASISAAADPRLQQAITWLNTLKTQFGLDLDSLQAASSDASFR-RYFRLQA-QNRSLILMDAPPATEDCKPFVQVTQLLAPTGIHVPDILAADTEQG------FLLLSDLGQDNFQTALKTPMPQSELDKLYRST--LLTLVKLQQADTTGLPPYNEQRLLEELQVFPEWYVQKHRQFELSEKDHNMLRKTFAELVQANVQSAT---------VLVHRDFHSPNLMMPLPGQTEPGVIDYQDALAGPITYDIASLVMDARVTWTEEQQLDWAIRYWQAAMEAGLDVPADFAVFHQQYEWMSLQRNLRILGVFARLSLRDGKHHYLDHMPRLLGYVHQVASRYESFNGLLRLLNRLEGRQTVLGMTV
3I1A Chain:A ((3-330))----------KQPIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEE--SIYIIDWDEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYG-----------EINVDKTILSYYRHERIVEDIAVYGQDLLSRNQN------NQSRLESFKYFKEMFDPNNVVEIAFATE----------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1378 -27791 -20.17 -89.94
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -20.17
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: