Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGILEYTSQLDIEFKKALGLIF-K-QELNLERIKQGEVNYSYKVTSEQDIPLYHARIFRYEG-HPDTEKLLWISGELKK-RNIPQARILYREKSSINFPNGFMVSNWIEGKNGWQSI-KDG-AYSLKNFTLETAKILLKIHEIKVASFGWPYGKGWGYYNTYQDRITGLPNNDEFKKLFNNDYLKRKYVLNIVSLLLKALEKIPF-PEQPILAHSDPTPDNIIVRN--DRSLVLIDWDDSEGSWWVRDYSYLRYWS-DKPEEIKAGFFSGYGKIDMNESEIEIAELVEWILQSLRLLPYYKFSFADEGKYQKRMTRLKENVRQLKLLV
3N4U Chain:A ((7-282))-----------DQVEKAIEQLYPDFTINTIEISGEGNDCIAYEI---N-R-DFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNL------VLDFREKINEDN--KKIKKLLSR-ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP--TVLEKYRMKEKYWSFEKIIYGKEY-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1158 28777 24.85 108.18
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 24.85
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.317

(partial model without unconserved sides chains):
PDB file : Tito_3N4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3n4u-query.scw
PDB file : Tito_Scwrl_3N4U.pdb: