Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGSHWVYKLIVYSKLKNKLMLTYDKNEFSLPSYQPELAHVAIVGHINAFVKEHFQLKTTVLRCCRQLENIRIYEVEILEEESVQFANHVWLTLSQPSDLKKLNSDDQTILKSWIDTQRSVGIPWFHVGWRNQMERWAANVLSNSSLTFAQIRSWERSALFRIISDTQNYYFKAVPDVFNHEPLLSDYLFQHYPLYVPE----IVQVEPNKNWYIMREIQGSLLGQTGKIAYWRQAIEQLAVMQKQSTRHIDELKKRNCPVRPVAKVIKSYVKCSFDDLYESHHISRETYQKLNTSIPTIINICDKIEKSNIPLALEHGDFFGGNIMVQNGQPVIYDWSDCTLSHPFLSIMVILKEVEQFFSEEVAQSLLNDYLEKWSGFDSKPHLIEEYNWLKVIAPVYYLTIYQTFIFPAFNDNWDKQQIIEGYITEWLTMPML
4NXT Chain:A ((9-345))-----DLKKSRLRMSLQEKLLTYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPDM-----PLRDMYLSG-SLYDDLQVVTADHIQLIVPLVLE--------QNLWSCIPGEDTIMNVPGFFLVRRENPEYFPRG---SSYWDRCVVGGYLS------PKTVADTFEKVVAGSINWPAIGSLLDYVIRPAPPPEALTLEVQYERDKHLFIDFLPSVTLGDTVLVAKPHRLAQYDNLWRLSLRPAETARLRALDQADSGCRSLCLKILKAICKSTPALGHLT-----------------ASQLTNVILHLAQEEAD-----------------WSPDMLADRFLQA---LRGLISYLEAGVLPSALNP---------------------------------KVNLFAELTPEEIDELGYTLYCSLSEPEVLL


General information:
TITO was launched using:
RESULT:

Template: 4NXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1537 -82869 -53.92 -248.86
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -53.92
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.161

(partial model without unconserved sides chains):
PDB file : Tito_4NXT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4nxt-query.scw
PDB file : Tito_Scwrl_4NXT.pdb: