Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------KLCKWTVLNSEGEIIDSGSCLNTEYMKHGD-IHVEFENDCTPIIFGADRVAEKVTIKG------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1ABR Chain:B ((1-267))IVEKSKICSSRYEPTVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQL--WTL-KSDKTIRSNGKCLTTYGYAPGSYVMIY---DCT----SAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLMRQGWRTGNNTSPFVTSISGYSDLCMQAQGSNVWMADCDSNKKEQQWALYTDGSIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRWVFKNDGSIYSLYDDMVMDVKGSDPSLKQIILWPYTGKPNQIWLTLF


General information:
TITO was launched using:
RESULT:

Template: 1ABR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 57 -1429 -25.06 -30.39
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -25.06
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_1ABR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1abr-query.scw
PDB file : Tito_Scwrl_1ABR.pdb: