Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------NFCAYYIKTLEGWELVGWVKIGGQDELTWKGDSIGVKA-EDTDCKVVLVNGQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3G8Q Chain:A ((1-278))MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVAGVVYLG-------RGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR


General information:
TITO was launched using:
RESULT:

Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 108 -3060 -28.33 -69.53
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -28.33
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_3G8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3g8q-query.scw
PDB file : Tito_Scwrl_3G8Q.pdb: