Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADTPPLTLPEALRRTLPAARWELTHTNDAGTRVYRSQ----RFLIKVHPRGPSHPLFSEKERLRWLAPR-VPVPPLAGYAEDADHAYLALARLPGMPMNHPDARLHARRNADLLARALAELHALPIRDCPFTHTLTERLRDLRTRLTAS-------GE--IPTPVAERFNALVRQRPHDEDLVVTHGHATLEHVLVNGE--YVEALTGVGRAGLADRHVDLAAAHTSLTQD----YDPDAAAHFLDTYGRA---RIDLHKLDYYARLNALA
4H05 Chain:B ((13-266))-----------------PGCEWVVVEDGASGAGVYRLRGGGRELFVKVAALGAGVGLLGEAERLVWLAEVGIPVPRVVEGGGDERVAWLVTEAVPGRPASARWPREQRLDVAVALAGLARSLHALDWERCPFDRSLAVTVPQAARAVAEGSVDLEDLDEERKGWSGERLLAELERTRPADEDLAVCHGDLCPDNVLLDPRTCEVTGLIDVGRVGRADRHSDLALVLRELAHEEDPWFGPECSAAFLREYGRGWDGAVSEEKLAFYRLLDEF-


General information:
TITO was launched using:
RESULT:

Template: 4H05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1033 -13241 -12.82 -57.32
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -12.82
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4H05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4h05-query.scw
PDB file : Tito_Scwrl_4H05.pdb: