Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDMMNKPDLFRSGITSL---RDSAKIEQIHKGYSSDSKYIVYGQSGRPQYILRAYGIDQ-DANKRLEFNRLSMMEEQ---GVACSRPVDIGVLPDKRLGYMIVSYVEGNEASE-ELPLLTENEQYAIGVQAGEELKKIHQVACPDSMK-SWQDRM--AAKHQRYRTEYASC--GVAIDHEEKLLTFIDSHLHLMQDRPNLFQHDDYHIGNLIVKD-GKLSGVIDFNRSDWGDPLHDFVKVGMFS-AEVSVPFAVGQIRGYHHHSEPDEAFWRLYSLYLGMTLISSVVWILKVRPEELDSMMMKIDRVMDDHDHFELIVPKWYSRFQHEA
5IQC Chain:A ((9-288))----ATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSV-AYLV---NN--EYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYIS--DELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNAT--TVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGN--IDIEKAKEYQDIVEEYYPIETIVYGIKNIKQ----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1183 16315 13.79 61.57
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 13.79
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: