Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYQWEPQQTLEPPLALELIREQFPDLSPVQIRVLGAGWDNTAFVIN----EDLIFRFPRRE-IAVPLLEAEWCILPKLAPR-LPLPIPIPKWRGSPASRFPWPFIGYKMLPGFTACYANLSEREREALAQPIARFLSHLHATPRSIISGCQIPGDNQGRIDWKQLMPKIRKNIEELSLLSLLEKRNELEALLESLQNLRP----PMASIVVHGDFYVRHILVDEIHHFAGVIDWGDIHLGDPAIDLSVAHS---FLPFCAHEKFREAYGEI----STDTWSLALLRAIYSSTLLVLYGHHSKDPVILR--EGLRSLKIMVGK----------------------
1ZYL Chain:A ((4-328))---SAFTFQTLHPDTIMDALFEH--GIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQF------EADNIDQMEAVGRYLGRMHQTGRKQ------LFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRD---GPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1302 -30792 -23.65 -108.42
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -23.65
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: