Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSNNNNPLTRDEILSRYFPQ---YRPAVATSQGLSGGSCIIAHDTHRVVLRRHHDPDAPPAHFLRHYRALSQLP-AS-LAPRALFYT-PGWMAVEYLHGV-VNSA---LPDADELAALLYHLHQQPRFGW-RIALSPLLAQYWSCCDPA---RRTPFWLRRLKQLQKNGEPRPLRLAPLHMDVHGDNIVLTS-AGLRLIDWEYAGDGDIALELAAVWVEDER---QHRQLADAYAARARIDARQLWRQIRLWHPWVIMLKAGWFEYRWRQTGEQQFIRLADETWRQLRMKG
4R78 Chain:A ((19-281))--SHMEKIIK--EKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQ---TPVSHEKIAIYKILQDTIWSLWTVYKEEQ---------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1089 -10976 -10.08 -44.80
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -10.08
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: