Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKTLEPWLHRYWNIGPARMQALASGHTNKTYLVECDAGRAVLRVSWSGKPVGQVDREAAILGHLGETRAAPMLPALPRLRPTVDAQSGVRLPDGSWLHLFEHIDGSP-GL-P----------------------PEAETGAIDAMRALAHLHAALAAIPVTES--APLAWLSARHARVAARAAPPLPGNLSDRYGTMIRRIGAHLDAAARWLTGTVHWLHGDYHAGNLLYVGGAVNGVLDFDDVGQ-------GAQWLEAAFALFALSRDAGRD----------D-------RFVFDARRWDAGLQAYAATRPDAVPDWMHDHRDALMALFCADQTLIHLEAAQRGLWVPGPGIGFLGGWRQLLDGAAP 5JY7 Chain:L ((121-437)) ---------------DAPPRVFGAEQSNTSVVF---GEDAIFKLFRRI--TPGVHPDIELNRVLAR----AGNPHVARLLGSFETEWE-GE-PYALGMVTEFAANSAEGWDMATTSTRDLFAEGDLYAEEVGGDFAGEAYRL--GEAVASVHACLAHELGTEEVPFPADVMAQRLAAAVDA-----VPELREHVPQIEER----YHKLAD-TTMTVQRVHGDLHLGQVLRTPKG-WLLIDFEGEP-LDERRRPDTPVRDVAGILRSFEYAAHQRLVDQAGDDDDRARQLAARAREWVTRNCASFCDGYAAEAGTDPR---DSADLLAAYELDKAVYEAAYEARHRPSWLPIPLGSIA------------

General information: TITO was launched using: RESULT: Template: 5JY7.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 1100 -10140 -9.22 -38.41 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain L : 0.67 3D Compatibility (PKB) : -9.22 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.289

(partial model without unconserved sides chains): PDB file : Tito_5JY7.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5jy7-query.scw PDB file : Tito_Scwrl_5JY7.pdb: