Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFANE---VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL
2Z1N Chain:B ((3-260))-LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL-RPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL------------SMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGAHI


General information:
TITO was launched using:
RESULT:

Template: 2Z1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1284 -17058 -13.29 -73.84
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -13.29
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_2Z1N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2z1n-query.scw
PDB file : Tito_Scwrl_2Z1N.pdb: