Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERIKINSITIDEAKKHAVFVVKKELCCNVNKVQYLGGGSFGYIYKVDIDRPPYTVVMKACRCDNMCEREAFELNLLAKDSLIQIPKVYFTYLKDDIVSIDYICMEYVEGKDCFTDFSKLFLSKAKKRAFADKITSAMYAWHSKTNDKF---GLVQNA--N-YDEWLDYYKPFAFDILQKARNMVDRGELESYFLKVMELAWNNFDYIFS-EKVEHASLIHGDLNVMNILADDKLNPIAIIDPLESKWADREYDLFQLKNLT---GNAFGLYEMYKSKYPTSKNCDLKVAFYAMFHEIYCYIRSGRRTKINHLRCLLNLKIELNNVSIHS
3W0O Chain:A ((9-277))---------------TSVEKFLIEKFG-SVSDLMQLSEGEESRAFSFDVGGR--GYVLRVNSCADGFYKDRYVYRHFAS-AALPIPEVLDIGEFS--ESLTYCISRRAQGVTLQ----D--LPETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIA---DPHVYHWQT--VMDDTVSASVAQALDELMLW-AEDCPEVRHLVHADFGSNNVLTDNGRI-TAVIDWSEAMFGDPLYEVANIFFWRPWLACMEQQARYFERRHPEL-AGSPRLRAYMLRIGLDQLYQS--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1163 -74795 -64.31 -288.78
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -64.31
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_3W0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0o-query.scw
PDB file : Tito_Scwrl_3W0O.pdb: