Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAHVPSGPDELTPEW-LSRALGAEVTSVSWERVGSGQIGACYRLTLKGEEKVPARLVAK-MASEDPTTRAFLA-SAYRTEVLFYRDVVPTVAVRTPR-CHYQAIADDNSAFVLL-LEDMAPAEQGDQLAG-CTPQQAAAAVT--NLAGL-HGPRWCDKTLTEIPWLSVVTEDDAAVLTEVFAPAVDAFVQRFTGRLSDEDIDTLRRVAD-RIA-AWAVAR-----PERFGLVHGDYRLDNLL-FAPPPQQTVTAVDWQTLSIGHP-VRDLSFF-------------LGTAMDPAERSAHERALVETYHTALTGYGVDDYDLQSCWE-DYRFGALQGP-LITVLGCAVGTPTERGDRMFLAMTR-RS-CAAIRELGSLELI
3DXP Chain:A ((20-359))------RFDTEALEAWMRQHVEGFAGPLSVEQFKGQSNPT--FKLVTPGQTYV-------MRAKPGAIEREYRVMDA-----------LAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPG-----------NYFQRQIERWTKQYKLSETES-------IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNL-MFHPTEPRVLAVLDWELSTLGHPMG-DFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVDG---TASSAQALDAGKRARPMAEMGWEYAKKAKQ---


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1341 34804 25.95 118.38
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 25.95
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.148

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: