Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHGRSRLYRYLKSGRLSAKAGFDRYPD-----------LRVKQLGGSHNVYLVSDHRSHKKCIVKSFAGSGPKSVQHMEKEYKRLRQAGRLVDDRRWVHVA----RPLCKSNGEGFFAE-ELVSGKALGDYMRDAMANGRDSELYEKLTMLAGFLALLHKKTERPSHVKPSNIRDELKKHARQASKGGAFAPHELKRIESLVDNVTSNDLISQTRRGLVHGDANPSNFLYDKK-RLNVIDMERSGYRD-------------------------------------PVYDLGMLAGELCHYAMKYGGNEYKADPFIGHLYWTYAGNFKDQLGTFIRLTGR--------NPIYMANSLLRIARHPFFSPEYKRRLARKAYECLKSLKK---
1B6C Chain:B ((14-339))----TTLKDLIYD-MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT--VEGMIKLALSTASGLAHLHMEIVGTQ-----------------------------------------------GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG


General information:
TITO was launched using:
RESULT:

Template: 1B6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1330 18263 13.73 69.97
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 13.73
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_1B6C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1b6c-query.scw
PDB file : Tito_Scwrl_1B6C.pdb: