Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MIVSDGAVRQRLEAFCRNEFDASELTISRLERIPEGHSGFTYFVDFVDGPHARLVLRLPPPGARPQGPADVARQGRIMTALHHRGLPVPEVHVISEDPGALDGRPFILMEAIDGVRADKAAA----EADNAELARAAVAVMREIHAVDPADTGIGA--------EPARSLADELDRWSALIAKAPDELTKRAADLRALLSRSLPADHGPARLVHGDFTYGNLLFRGGTVAAVLDWEIAQLGNPLLDLGSLCVIAKRHDYPNDPNPSGAIRATVEWLIDAYGAAGPVEWTVALSYYKYAAIVGYNTMLHRRGKRPDPIYDLMGDTVIGLIDGAIEILT 3HAM Chain:A ((1-299)) -------MVNLDAEIYEHLNKQIKIN--ELRYLSSGDDSDTFLCN------EQYVVKVPK---RDSVRISQKREFELYRFLENCKLSYQIPAVVYQ------SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDC-------STDDFGKEFGRKVLKYYQ-----HKAPEVAERKAELNDVYWSIDQIIYGYERKDREMLIKGVSELLQTQAEMFIF--

General information: TITO was launched using: RESULT: Template: 3HAM.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1254 -42507 -33.90 -148.11 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : -33.90 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.396

(partial model without unconserved sides chains): PDB file : Tito_3HAM.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3ham-query.scw PDB file : Tito_Scwrl_3HAM.pdb: