Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEPSFENNLATVIARRFEGA------KLTSVNQLTAGASQQTFRLTVEEGS----GETSVYAFRRAQPGLESSSYGQLPPSLEVELLQLAAEGNVPVPEIHCVVGAEDGLGDGYIMEWLEGETMGQRIIKLPELADARESLAFECGQALARIHALPVSRSLSEKLHSVSPEALVRETWDAYKALD---------T-------PQSMIDYTAQWLLSHLPQ-DSRTTLVHGDFRNGNLMVTPDGIKAVLDWELCHIGDPMRDLGWLCVNSWRFGNR---------SLPVGGFGRVEELVAGYESVSSHR----------VDRDALRFWEVFGSFWWSITTLGMAKTWRTGETPSVERPVIGRRSTEAQMDCVNLLIPGKVTSLIEAVEDQNLPSASELINSVQSHLREHVAEKLEGADKFLVRVAINSLSIADRELAYRDQAERAERVGLSALLSDPENADRPFAADAADMCGKADTLADLRWRLVTALREHKPLNAKILEEHLRQTVAHRLFIDQPKYSALID 1NW1 Chain:B ((53-397)) -----KERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLG-PKLYGIFSG------GRLEEYIPSRPLSCHEI-------SLAHMSTKIAKRVAKVHQLEVPIWKEP----DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK--RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVEL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1109 -1884 -1.70 -7.00 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain B : 0.62 3D Compatibility (PKB) : -1.70 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.244

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: