Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHTHDVTVMGDVVRKRYVSWD--DREPEREWAGLVHLSRESPGLAPTPVAREVEDGRPVVVMSLVPGEPLTSA--LSAAQSKAFAEVLRRLFAVPVPEDLAERANGPQVMRDHVREWLSEDYDLTQCQ---DQALVRTAKDRAVAWLAVV--QLPDLVDRVVAQGDGNLDNVLWDGEVCRLIDWEEYGASDLTYEIADVVEHASSR---------------LTRSLDVDALLADLDL-DPT-------QRERLAVHRLLLACFWLMMLLPGNGGFKRNPAGSTEDQARHVLALLDQS
3C5I Chain:A ((67-334))---------TRVLFRIYGKHVDELYNTISEFEVYKTMSK-YKI-APQLLNTF----NGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTN-CLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLPTPKLIDEILEAVEVQALGAHLLWGFWSIIRG-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 809 -16645 -20.57 -74.31
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -20.57
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: