Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGGNMAEKDLATRVARVLGRN-SVRLEDLPPGSSRGAARVLSEEGEPIAFLRIDLGVATDVTVGKALVSEMALVKRAHDL-GFPVPKVFALLNDP-------PVAVMELAAGTARPDE---AEAERVGPEFMGHIARLHSIAPAEFGLD-AP----ATVSDAIRQDLDCYMADAEARGITRRPLVRLAARILRHALPRSAEPPAMLHGDVGAGNFMVDN-GRVSAILDWELAHAGDIHEDLAWLWTRGAHTAFGDPRQRIAEYEAAAGKALD--PDRLAWHVAFVTFKSVIGLQRRMYAQGDDPGLLIILIAILTYETLLCAALGRILGIQLDMMEEAPVEGVTETVRLIELMRHVAPPANREGELLQQYLRAEAAQRPWNADRLRADARERLGAHPDQLDMLVDSAAPDRFADLLRVFGAAAGRRCKAFPNAERRVRRALAIGLGKQN
5IGI Chain:A ((5-279))---TTADTSQLYALAAR-HGLKLHGPLTVNELGLDYRIVIATVDD-GRRWVLRIPRRAEV----SAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREF----VVNDKRLHRWQRWLDDDSS-WPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVF---GEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYAL--------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1106 -24743 -22.37 -97.41
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -22.37
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: