Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEFQLDKDWRLQPI-KGATGQTYMGIKE-TEKVFIKRNTSP-----------LLAALSK-EGL-APKMIWTKRTANGDVL----TAQEWLEGRLLHA-----DEIGKRNDVIDVLYQLHHSNLLKDMLKKIGGEVCTPLTMLKEYKRQLPKEL----KRNSYLKEVITYLYNHLPEYPETSYVAVHGDVNHRNWLVSN--NYLYLVDWDSVMVADPAVDLGMILSHYVPRSGWNQWLLSYGLI---PNESTVQRIYWYGLFSFLQEIVRHHQEGERRAMTAEILQLKRMFSI 5IGH Chain:A ((26-298)) ---------PLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDA--GMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDS--SWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFGE-EGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSGNEEYLAAAKAQLA-----

General information: TITO was launched using: RESULT: Template: 5IGH.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 996 -3215 -3.23 -13.40 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : -3.23 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.325

(partial model without unconserved sides chains): PDB file : Tito_5IGH.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5igh-query.scw PDB file : Tito_Scwrl_5IGH.pdb: