Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVYTKITQQDIDYLFQDYD-G--IEQIKGIAEGVENTNYLVNTKNQNKFIFTIFEKRTKRSDLPFFHKAMSEFYHKGIACPTPIKVNENDIFNIKEKPCAIYSFIEGS-QIQSLN----NDAMVSLAKNISTIHHIGAQSKLSRENDMLLPSWKYIINKFKDYDGENISE-FNYIKNLISSLESQFPQ-NLKKSLIHGDLFKDNIFFKNDEVSGFIDFFFTCSDTIVYDLATLINAWFLNYENFNENYFEIFFDHYFGSISWSNEEKESFNFYLKASAIRFFLTRIHDKNFNKDGEVNHKDPMEFFAILRFHEKNNLQDFF
3DXQ Chain:B ((2-257))-------MTDEARAKLAAIPMLAGYTGPLERLGGLTNLVFRA-----GDLCLRIP-------NRANEAVAAREAAKAGVS-PEVLHVDP-------ATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNV----TLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG-ERMWIVDWEYSGMNDPLWDLGDLSVEGK-----FNANQDEELMRAYFGGEA-RPAERGRVVIYKAMCDLLWTLWG------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1091 -18660 -17.10 -78.40
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -17.10
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: