Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNWSFGIDNDKLIGLVLEGKKTATSSLYNFDKIPVIGKESIIHFDNEKDACIVETVDYKIIKYNEMTEELAKLEGEGDLSLNYWKQVHLNFFKSVNPNFKEDDKIIFEIFKVTKNLVEERLKLGKSIASKNTDLLGNIVKVEEINSGFNNTLFNINDKYVIKVCTNKELENTFENEKDFYLSNKD----NCFIPKLYKYDDSKVDCDYIYEVIEKIKGKTLYY-YWYKMNEADREKTIEKLIDIIKKFHSVNGKEY------DWKNKIKGEIKNRIIKCKKYFKIKDYNMILESIDKYDEY-LSDNKFALIHNDLHFDNVIYNN-GKL-TIIDFNDSIQAPIDFEFRLLYMCQE--QPWKWADIEMDPYQKPEDYKNIWNYIKKYYKELNEIKFLEQRMIIYRIWNDTGHLKKYHNVELTKGIVENSKKLI
5IQI Chain:C ((19-257))--------------------------------------------------------------------------------------------------------------------------------IEHYFDNF-KVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYISD---ELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLE-EYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGN------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 863 1325 1.53 5.94
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : 1.53
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: