Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLTHESQQLTTPKENGWCGPLPRLVASLSSLVLPLPRTESYEFAGCAVNNRFDPRQGAFRDLPSSPPIPLAVSLPLNNPPANFRSSAASMPPSPVRRPAVPPRQPFTSRTNALEGFPSPHPSSTPSKRRLAPSATLPPPSYAREHGIFLGRRRPKDCEGVGQFVKRVHWEGKVMVVKYGR-----SVRQAEVDVMKMVRER--THVPVPEVFGTAFDEAAGELFIYQEFIEGTTLTA-AWPTLSHPDLSRIKSDFSRYVHELGALALPPDASLGSCDASSSYRLSEPCHAVFAQKPEPKVQSVEDFTRWIRFEISRRSRDLANSRKDFDLERLFRDGDVGLVHADLHGENILVKN-GRIAAILDWELAAWMPPLVEALSLVEYSRMFDEDAGAPIDALIDALGLEDATRDVLDGLCTALRAWPDEKWEEVS
5IQI Chain:C ((37-256))---------------------------------------------------------------------------------------------------------------------------------------------------------------GYDSVAYLV---NNEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYIS--DELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDN------KQNVLEEYILL--------RETIYNDLTDIEKD----YIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEE--IGTNFGEDILRMYG----------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 817 -35158 -43.03 -166.63
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.63

3D Compatibility (PKB) : -43.03
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.179

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: