Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDMMNKPDLFRSGITSLRDSAKIEQIHKGYSSDSKYIVYGQS-GRPQYILRAYGIDQ-DANKRLEFNRLSMMEEQGVACSRPVDIGVLPDKRLGYMIVSYVEGNEASEELPLLTENEQYAIGVQAGEELKKIHQVACPDSMK-----------SWQDRMAAKHQRYRTEYASCG------------VAIDHEEKLLTFIDSHLHLM--QDRPNLFQHDDYHIGNLIVKD-GKLSGVIDFNRSDWGDPLHDFVKVGMFSA--------EVSVPFAVGQIRGYHHHSEP--DEAFWRLYSLYLGMTLISSVVWILKVRPEELDSMMMKIDRVMDDHDHFELIVPKWYSRFQHEA
2QG7 Chain:D ((109-431))-------------------DSLEFQIINGG-TNI-LIKVKDMSKQ-AKYLIRLYGPKTD--NREREKKISCILYNKNIA-KKIYVFFTN---G---RIEEFMDGYALSRED-----IKNPKFQKLIAKNLKLLHDIKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVG-DSISFIDFEYSCPMERAYDIANHFNEYAGFNCDWDLTPSKEEEYHFIMHYLGTDDEELINQLIREIQPFYICSHINWGLWSLLQGM-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 934 26082 27.93 107.33
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : 27.93
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_2QG7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2qg7-query.scw
PDB file : Tito_Scwrl_2QG7.pdb: