Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDAQGSLVHELK-SLPCWPAPVQAIRPL-TGLSGGSLLIELCDGRRYVARSQNAQLQMQAVSRERERQVLCAIGEQVARSD---FLPQVLFYNARWLVVSWLEGSPWPHTLA-------------DDACAQRHLVTLMRRFHPVDSE-LQ-LD-----IPSRLQFYRQQLSAEKQ-PEALFSLCARFASLR---SPCWWFPVLAHHDIHPGNVVSDG-AT-LALIDWEYAARSPLACELILLFEANGFNRAQRQQFCRYYAEAIYSTETVYAADSKCVGSSAAALEDWLHRLQQDIASWQPWCEMLMAMWSAIRFEQTDDVQYAVWRDNYLKAAEQSLGKRE
5UXA Chain:A ((2-299))-SKDIKQVIEIAKKHNLFL--KEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDV--MPRTKVEKQALDLV----NKYAISFQAPNWIIYTEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRA--FGEEGLEALILAYKEIGGY--------------------Y-WPKMKEHIIELNAAYPVSIAEFALVS----GIEEYEQMAKEALEV---------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1146 -21314 -18.60 -79.83
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -18.60
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: