Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MPLRNSDRTREEILTRYFPQYRLIAPQAPSGLGGASCII--------EQGEQRLVLRQNHDPLA----SSSHFRRQFRALKRLPADL---VPKPRFYRQ-------GWMAVEYLAGEI----------GNTLPET---------AVLAAMLCHLH----RQPRLGW-----RVTLLPLLEQYWQQASAD-RRTPFWLAQLKRLRKTGEPQPL--RLSPLHMDVHAGNIVHTSLGARLI-DWEYAGDG----DVALELAAVWSEDDAARQR------LITDYARVAHMNADALRRQVRRWRPWVVMLMAGWFEMRFQQSRDKQF---------IALADDAWRQLQTKG----
3ATS Chain:A ((1-357))TLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH


General information:
TITO was launched using:
RESULT:

Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1166 -23797 -20.41 -86.85
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -20.41
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_3ATS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ats-query.scw
PDB file : Tito_Scwrl_3ATS.pdb: