Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTTSGRYVLTV-FEVLKQ-EELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAG--KPACLVACLKGSDTAL-PTAEQCFHTGAMLAKMHLAAADFPLEMENPR-YDAWWTEACARLLPVLSQDDAALLCSEIDALKDNLGNHLPS-GIIHADLFKDNVLL----DGGQVSGFIDFYYACRGNFMYDLAIAVNDWARTADNKLDEA-LKKAFVGGYEGVRPLSAGEKAYFPTAQRA-GCIRFWVSRLLDFHFPQAGEMTFIKDPNAFRNLLLSLD-----------------------------
3CSV Chain:A ((4-333))---------------SREDEIRDFLATHGYADWNRTPRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDIS-APEIYAEEHARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE--GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRDVPAQVEAQMIDHYIQAT--GVDESHFRSAYAVIAVQRNMRILGIFARLSQ-----RFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1266 -10044 -7.93 -35.87
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -7.93
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.303

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: