Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNRVSSALEDAFPNRTVDNVSSAGISWNAQNRTVAVDFGDGQRVFLKVAVNGD--RSRIERERAVISYVGANCAVSVPNVIATETT----------GPVPYLATEPVSGQPLTTLLADATRTERAALAHDVGSALARVHDCRFEEHGHVVGGDADHLELDTGTWTDVLVE--TISEMREMA-PCDRFDQHFEMVSDAVERNRDRL--DRASATLLHGDPACPNCFRTG----DGVGFLDWELSHVGDPVRDRSRTLDQQFDSLREGSPEGVVSAFYDGYRSQAGGLPSGFEERRPIYEVIRLLSVSGYFERTADYRDESRSDLAAWLEAEMRRRLDAIRR
6EF6 Chain:A ((31-320))-----AQQALTHYDVSDNASLRLL---NLSENATYLVEDG-EHQSILRVHRQDYHQPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPADVPRHVVHFEMVGGAEPDEES--L----TLDDFQTLGRITASLHEHSQRWTRPAG------FGRFSWDWEHCLGDTPRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHD---PRLGEWQESWVAGYRSRR-ELPAADEAMLPSFVFLRRLLLLAWMGS-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1201 -9109 -7.58 -34.24
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -7.58
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.240

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: